BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027E02LP1|AL428730
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1690 1720 0.0
>3x_Contig1690
Length = 13018
Score = 1720 bits (865), Expect = 0.0
Identities = 875/881 (99%)
Strand = Plus / Minus
Query: 3 aaggttcggtaatcgacgtgaaatccttgcaatcaacttcagatgcatttgaaccacaca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6673 aaggttcggtaatcgacgtgaaatccttgcaatcaacttcagatgcatttgaaccacaca 6614
Query: 63 tatatcataagggaatatcgttattgagatcactccaacaaagtgttgggaaagaaaact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6613 tatatcataagggaatatcgttattgagatcactccaacaaagtgttgggaaagaaaact 6554
Query: 123 tcaacagagctctcgcccagatyttctcagagtcgtccacattccatgaaacttgtatca 182
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6553 tcaacagagctctcgcccagatcttctcagagtcgtccacattccatgaaacttgtatca 6494
Query: 183 aaccaatggatatctttagaagaatgggcgagatthtaaaatccgaaaacattgcaaact 242
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6493 aaccaatggatatctttagaagaatgggcgagatcctaaaatccgaaaacattgcaaact 6434
Query: 243 tctacagctcatggactaggactcctggtatcccaatcatttctgtaaatactgatactg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6433 tctacagctcatggactaggactcctggtatcccaatcatttctgtaaatactgatactg 6374
Query: 303 aaaggactaccttggaacagcaccgtttccttttggaaaagacagatgttgaggacattc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6373 aaaggactaccttggaacagcaccgtttccttttggaaaagacagatgttgaggacattc 6314
Query: 363 cttaccatattcyactttttgcagttcaatcttcaggagaggatgatactaagaatggat 422
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6313 cttaccatattccactttttgcagttcaatcttcaggagaggatgatactaagaatggat 6254
Query: 423 tatttactgatagaactctgaaattatycgaacccgaacttattgtgaacagtggagcca 482
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6253 tatttactgatagaactctgaaattatccgaacccgaacttattgtgaacagtggagcca 6194
Query: 483 ggggcctataccgtgtttcttatgagacggataaatgctacgagttgatcaatgaagccc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6193 ggggcctataccgtgtttcttatgagacggataaatgctacgagttgatcaatgaagccc 6134
Query: 543 tcaagaactctaaaatttccgatttggatttattcaaaatattcattgacctgagatctc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6133 tcaagaactctaaaatttccgatttggatttattcaaaatattcattgacctgagatctc 6074
Query: 603 taataggcagtgaataccaaaaaaagatacacatcgatggtgtcttaatgatattgaggt 662
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 6073 taataggcagtgaataccaaagaaagatacacatcgatggtgtcttaatgatattgaggt 6014
Query: 663 gcctggcatcacatgttgatttaacggaagaactataccgtggattatctatcggtttag 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6013 gcctggcatcacatgttgatttaacggaagaactataccgtggattatctatcggtttag 5954
Query: 723 atatcttgcaaaccatagaaaatgctttaagaacatacaccggtaaatctgagaaagctt 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5953 atatcttgcaaaccatagaaaatgctttaagaacatacaccggtaaatctgagaaagctt 5894
Query: 783 tcattactgatatttatgtccctctatgggataaattttcttggaatgactttcacgttt 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5893 tcattactgatatttatgtccctctatgggataaattttcttggaatgactttcacgttt 5834
Query: 843 cctcatatcagctaaaagttatgtcaaaggtgatgtttggt 883
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 5833 cctcatatcagctaaaagttatgtcaaaggtgatgtttggt 5793
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6624
Number of Sequences: 1807
Number of extensions: 6624
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)